j-andrews7
Follow
-
CRISPRball Public
An interactive exploration/visualization platform to help you lift the fog from your CRISPR analyses.
-
iBET Public
interactive Bioinformatics Exploratory Tools
-
A curated and summarized list of bioinformatics bench-marking papers and resources.
-
kenpompy Public
A simple yet comprehensive web scraper for kenpom.com.
-
cellNexus Public
Forked from MangiolaLaboratory/cellNexusCurated multi-resolution metacell universe to boost AI-model and atlas creation
R GNU General Public License v3.0 UpdatedOct 13, 2025 -
-
shiny_immune_map_results Public
Forked from stemangiola/shiny_immune_map_resultsThis is a repository that include the data necessary to build a shiny app to dynamically communicate the results of our immune map paper
R UpdatedAug 17, 2025 -
halfBaked Public
Half-baked convenience functions for common 'omics analyses.
R MIT License UpdatedJun 18, 2025 -
ECLIPSE Public
An R package for classifying, comparing, and investigating sub-region structural changes of (super) enhancers (or other large domains).
-
-
KnowledgeDump Public
Gotta keep the brain empty to learn more. This is my easily digestible backup.
-
STRprofiler Public
A python package, command-line tool, and Shiny application to compare short tandem repeat (STR) profiles.
-
dittoViz Public
Forked from dtm2451/dittoVizColor blindness friendly visualization of any data in a data.frame format. Like dittoSeq, but not omics-structure restricted
R Other UpdatedJul 22, 2024 -
enrichplot Public
Forked from YuLab-SMU/enrichplotVisualization of Functional Enrichment Result
R UpdatedJul 12, 2024 -
dittoVizModules Public
Flexible yet comprehensive Shiny Modules for common plot types, designed to serve as a base for more complex/specialized modules.
R MIT License UpdatedJul 9, 2024 -
-
GEE Public
A dittoSeq-based Gene Expression Explorer
R GNU General Public License v3.0 UpdatedDec 6, 2023 -
-
rustbucket Public
Dumping ground for rust-backed R functions that I want to zoom.
Rust Other UpdatedJul 14, 2023 -
CountyAmenitiesExplorer Public
Code for a website to serve, explore, and visualize US county amenities and cost of living.
Python GNU General Public License v3.0 UpdatedJun 19, 2023 -
ShinyForResearchersWorkshop Public
A no-nonsense introduction to Shiny for researchers, clinicians, statisticians, and scientists of all varieties, with a focus on interactive reports and re-usability.
R MIT License UpdatedJun 17, 2023 -
Genotify Public
A minimal desktop app for easy and convenient gene annotation and lookup.
-
learngenomics.dev Public
Forked from stjude/learngenomics.devA guided, intuitive introduction to genomics for software engineers. Curated by the community.
JavaScript Other UpdatedNov 28, 2022 -
-
-
dittoSeq Public
Forked from dtm2451/dittoSeqColor blindness friendly visualization of single-cell and bulk RNA-sequencing data
R MIT License UpdatedApr 30, 2022 -
bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell UpdatedMar 2, 2022 -
university Public
Forked from stjudecloud/universityEducational materials for the St. Jude Cloud project.
JavaScript UpdatedJan 15, 2022 -
OneLinerOmics Public
One liner analyses and visualizations for bulk RNA-seq and ChIP-seq data
-
rosewater Public
Expression-aware gene assignment to ROSE output