Bioinformatics Stack Exchange

1 vote

2 answers

44 views

How can I improve ROC-AUC beyond 0.76 in predicting REST binding sites?

CommunityBot

1

modified 1 hour ago

2 votes

1 answer

200 views

CNVKit does not output all the accessible regions in the targets bed file

CommunityBot

1

modified 15 hours ago

1 vote

1 answer

45 views

How can I import xgmml cytoscape networks into a new session file such that style formatting can be applied?

CommunityBot

1

modified yesterday

0 votes

2 answers

113 views

Finding gene duplications in bacteria

CommunityBot

1

modified yesterday

1 vote

1 answer

30 views

NCBI BLAST database updates

gringer♦

15.7k

modified 2 days ago

2 votes

1 answer

38 views

How long should vsearch --usearch_global take for large nucleotide FASTA comparisons, and are there faster alternatives?

gringer♦

15.7k

answered 2 days ago

3 votes

1 answer

21 views

Interpretation of Mutect2 variant calling results when including low base quality reads (BQ<10) in ctDNA data from NovaSeq X Plus

gringer♦

15.7k

answered 2 days ago

0 votes

1 answer

71 views

Different layout after saving Cytoscape network

CommunityBot

1

modified Dec 29, 2025 at 6:04

1 vote

1 answer

11 views

Seeking feedback from users of PGAP2

gringer♦

15.7k

answered Dec 27, 2025 at 22:50

2 votes

1 answer

21 views

using dgnpop, there were no errors, but the results were Inf and NaN

terdon♦

11.4k

modified Dec 26, 2025 at 14:47

0 votes

1 answer

106 views

Bioprocess data visualisation and analysis

CommunityBot

1

modified Dec 26, 2025 at 0:02

2 votes

1 answer

54 views

How can I fix an igraph produced by Fella package?

CommunityBot

1

modified Dec 25, 2025 at 18:05

3 votes

2 answers

1k views

Finding common and unique data set by comparing two files based on their column and to split the columns multiple strings to print in output

CommunityBot

1

modified Dec 24, 2025 at 18:03

9 votes

7 answers

14k views

How to subset a BAM by a list of QNAMEs (read names)?

Timur Shtatland

845

modified Dec 24, 2025 at 3:12

Stack Exchange Network

Explore our questions

How can I improve ROC-AUC beyond 0.76 in predicting REST binding sites?

CNVKit does not output all the accessible regions in the targets bed file

How can I import xgmml cytoscape networks into a new session file such that style formatting can be applied?

Finding gene duplications in bacteria

NCBI BLAST database updates

How long should vsearch --usearch_global take for large nucleotide FASTA comparisons, and are there faster alternatives?

Interpretation of Mutect2 variant calling results when including low base quality reads (BQ<10) in ctDNA data from NovaSeq X Plus

Different layout after saving Cytoscape network

Seeking feedback from users of PGAP2

using dgnpop, there were no errors, but the results were Inf and NaN

Bioprocess data visualisation and analysis

How can I fix an igraph produced by Fella package?

Finding common and unique data set by comparing two files based on their column and to split the columns multiple strings to print in output

How to subset a BAM by a list of QNAMEs (read names)?

Hot Network Questions