jinworks / CellChat
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
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R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
Inferring CNV from Single-Cell RNA-Seq
📊 A universal enrichment tool for interpreting omics data
R's data.table package extends data.frame:
Make Complex Heatmaps
Repository for Programming Assignment 2 for R Programming on Coursera
R toolkit for single cell genomics
R package for detecting doublets in single-cell RNA sequencing data
R toolkit for the analysis of single-cell chromatin data
Accurate sample inference from amplicon data with single nucleotide resolution
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page: