R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series

R package to calculate the final size of an SIR epidemic in populations with heterogeneity in social contacts and disease susceptibility

Predicting COVID-19 pandemic by spatio-temporal graph neural networks https://arxiv.org/abs/2305.07731

A library of published compartmental epidemic models, and classes to represent demographic structure, non-pharmaceutical interventions, and vaccination regimes, to compose epidemic scenarios.

[RETIRED. Use the epichains package instead]. Methods for simulating and analysing the sizes and lengths of chains from branching process models

EpiSimulator: A Data-Driven Stochastic Hybrid Model for COVID-19 in Italy.

Methods for simulating and analysing the sizes and lengths of infectious disease transmission chains from branching process models

Agent-based modelling of pandemics using the Susceptible, Infected, Recovered (SIR) framework.

[Computer Modeling] SIR/SIRS/SIRQ/ISIR/SEIR compartmental models for numerical epidemic modelling in MATLAB.

D-FENSE is a repository for dengue data in Brazil, enabling predictive modeling, visualization, and public health support.

DeepAR implementation for seasonal influenza cases in German districts

Python implementation of behavioral-epidemic models for COVID-19

Epidemic visualization; Language: R.

SEIRD model project for the Programmazione per la fisica exam.

Collection of epidemic models. Complex networks, stochastic models and ODEs, all with non-markovian distributions (Erlang type).

Automated and Early Detection of Seasonal Epidemic Onset and Burden Levels

A Basic Compartmental Epidemic Modelling API

*Stochastic Modelling of Vector-Borne Diseases with Household Structures* Thesis submitted for the degree of Honours of Mathematical Sciences in Applied Mathematics at The University of Adelaide.