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  1. leviosam2 leviosam2 Public

    Fast and accurate coordinate conversion between assemblies

    C++ 117 17

  2. chaintools_bio chaintools_bio Public

    Utilities for the genomic chain format

    Python 7 3

  3. langmead-lab/reference_flow langmead-lab/reference_flow Public

    Reducing reference bias using multiple population reference genomes

    Python 34 2

  4. alshai/levioSAM alshai/levioSAM Public

    Lift-over alignments from variant-aware references

    C++ 34 5

  5. langmead-lab/FORGe langmead-lab/FORGe Public

    Code for building and testing variant ranking strategies

    Python 17 2