A package for scientific computing with Python
NEWS: NumPy 1.11.2 is the last release that will be made on sourceforge. Wheels for Windows, Mac, and Linux as well as archived source distributions can be found on PyPI. Numerical Python adds a fast and sophisticated array facility to the Python language. NumPy is the most recent and most actively supported package. Numarray and Numeric are no longer supported.
Matplotlib is a python library for making publication quality plots using a syntax familiar to MATLAB users. Matplotlib uses numpy for numerics. Output formats include PDF, Postscript, SVG, and PNG, as well as screen display. As of matplotlib version 1.5, we are no longer making file releases available on SourceForge. Please visit http://matplotlib.org/users/installing.html for help obtaining matplotlib.
Portable Scientific Python 2/3 32/64bit Distribution for Windows
WinPython is a free open-source portable distribution of the Python programming language for Windows XP/7/8, designed for scientists, supporting both 32bit and 64bit versions of Python 2 and Python 3. Since September 2014, Developpement has moved to https://winpython.github.io/
All-In-One PyGI/PyGObject for Windows Installer
Cross-platform python dynamic bindings of GObject-based libraries for Windows 32-bit and 64-bit.
EasyABC is an open source ABC editor
EasyABC allows the user to create, edit, view, play, convert music written in the ABC music notation language. The program was written in Python 2.7 and WxPython by Nils Liberg and runs on Windows, OSX, and Linux. Nils Liberg is no longer supporting this open source package, however I have volunteered to continue its support and development.
A userfriendly graphical front-end for phylogenetic analyses using RAxML (Stamatakis, 2006). Please cite: Silvestro, Michalak (2012) - raxmlGUI: a graphical front-end for RAxML. Organisms Diversity and Evolution 12, 335-337. DOI: 10.1007/s13127-011-0056-0
Edited version of the DDoS / DoS tool called HULK(.py).
Written in python 2.7 Version 0.5 BETA **I am not responsible for anything you do with this.**
Routines for wavefront propagation in IDL, Matlab, and Python
PROPER is a library of routines for the propagation of wavefronts through an optical system using Fourier-based methods. It was developed at the Jet Propulsion Laboratory for modeling stellar coronagraphs, but it can be applied to other optical systems were diffraction propagation is of concern. It is currently available for IDL (Interactive Data Language), Matlab and Python (2.7 & 3.x). It includes routines for generating complex apertures and obscurations and aberrations (Zernike & PSD...
Gestor de Processos per la versió de python 2.7.
Model, simulate, and analyze biochemical systems using one tool.
Tellurium (te.) is a Python environment supporting Spyder2 IDE and Jupyter Notebook aimed for large-scale systems and synthetic biology simulation. It combines a number of existing libraries, including libSBML, libRoadRunner (including libStruct), libAntimony, and is extensible via tePlugins. In addition other tools kits such as matplotlib and NumPy are used to provide additional analysis and plotting support.
A Python program/library aimed at GD-ROM image files.
This Python program/library is designed to handle GD-ROM image (GDI) files. It can be used to list files, extract data, generate sorttxt file, extract bootstrap (IP.BIN) file and more. This project can be used in standalone mode, in interactive mode or as a library in another Python program (check the 'addons' folder to learn how). For your convenience, you can use the gditools.py GUI program supplied in the Files section (optional). To use this project you must install the Python 2.7.x...
removes db.lck from arch linux system
packages needed python 2.7 place it on the desktop to activate type python2 /home/''/Desktop/remove.db.lck.py needs sudo privliges
an accurate 3D representation of the solar system Planets, Comets, Asteroids and their orbits written in Python 2.7. Animation feature allows to determine positions on orbit for any past or future dates.
Python (2.7) script validating the checksum of a file.
Python (2.7) script validating the checksum of a file. Supports md5, sha1, sha224, sha256, sha384 and sha512. usage -------- python CheckSum.py <algo> <filename> <checksum> example ------- C:\Python27\python.exe C:/Users/User/Projects/Python/CheckSum/CheckSum.py sha256 C:\Users\User\Downloads\pycharm-community-2016.2.1.exe f800ce642c6c838c17bb726bc0ae9680fd07b3801fd82ee402155bfd5ddded7c Checksum match! Process finished with exit code 0
Hyperspectral algorithms for Python
A lightweight hyperspectral imaging library that provides developers with spectral algorithms for the Python programming language. New for v0.14.x: a scikit-learn bridge (alpha and partial). The functions and classes are organized by topics: * abundance maps: FCLS, NNLS, UCLS * classification: AbundanceClassification, NormXCorr, KMeans SAM, SID, SVC * detection: ACE, CEM, GLRT, MatchedFilter, OSP * distance: chebychev, NormXCorr, SAM, SID * endmembers extraction: ATGP, FIPPI, NFINDR, PPI...
Overlapping Paired-End Reads accurately
OverlapPER: Overlap Paired-End Reads OverlapPER can be used when one needs to merge overlapping paired-end reads Requirements Python 2.7+ Usage python overlapper.py <forward_reads.fastq> <reverse_reads.fastq> <min_overlap> <min_similarity> Contributors Renato Oliveira - renato.renison@gmail.com Gisele Nunes - gilopesnunes@gmail.com Ronnie Alves - ronnie.alves@itv.org Claudomiro Sales - claudomiro.sales@gmail.com Guilherme Oliveira - guilherme.oliveira@itv.org...
Squid Videos/Music/Images/Libraries/CDNs Booster
... and performance of your Squid Cache. More than 800+ websites are already supported and can be cached automatically in order to get the best out of your existing Internet bandwidth. List of all supported web sites: http://www.unveiltech.com/videosboost.php SquidVideoBooster works with Squid 2.7, 3.4, 3.5, 4.x and 5.x. You will immediately save money and satisfy your users who will enjoy a better Internet experience. Try our free 30 days trial version and see the performance.
Immune repertoire assembly from RNA-Seq data
ImReP is a tool written in Python programming language (version 2.7) which is designed to assemble CDR3 region sequences from RNA- or TCR-(BCR-)-Seq reads (either single- or paired-end) and provide immune repertoire as a set of clonotypes with their counts.
Management of river simulations with Python
...: tdysarz@gmail.com Hardware required: PC that supports Python Software required: Python 2.7.x, HEC-RAS 5.0.3 Programming language: Python 2.7.x
SWIG-Python wrappers for libSBOL
pySBOL is a SWIG-Python wrapper around libSBOL, a module for reading, writing, and constructing genetic designs according to the standardized specifications of the Synthetic Biology Open Language (SBOL). This page provides binary installers for Windows operating system for Python 2.7 and 3.6. For installation instructions, visit: https://pysbol2.readthedocs.io/en/latest/installation.html For full documentation, visit: https://pysbol2.readthedocs.io/en/latest/index.html
Oscilloscope using PC sound card and Python 3
Oscilloscope using PC sound card and Python 3. Linux utilities amixer, aplay and arecord are used to set the sound card controls, generate and capture audio. Numpy is used for data manipulation and tkinter for the GUI and 'scope display. The long term goal is to use this as the basis for other instruments like a tachometer, rms voltmeter, wattmeter, tachometer, lock in amplifier, capacitance and inductance meters, etc. The data visualization will greatly assist in their development as well...
S.E.E.R. 2 is a full featured SCADA / Historian / Aggregate Analysis System developed to work as a 'front end' for mod_openopc. Written in pure PHP (HTML 4.01 Transitional), and driven by a web-based user interface for universal deployment.
A Python library for geometric objects in 3 dimentions
... and parallelism. Vectors are sub-typed from numpy ndarray class. Extensive unit tests are included. Test coverage exceeds 95%.
A GUI interface to Mantigora high voltage power supply for Linux
This program implements a GUI interface to Mantigora high voltage power supply for Linux. Dependencies: python-2.7, libftdi (libftdi-1), libftdi-python (libftdi-python-1), PyQt4 (can be installed e.g. from repository of Fedora)
A model to identify organisms present in metagenomes in seconds
FOCUS, an innovative and agile composition based using non-negative least squares to profile and report abundant organisms present in me-tagenomic samples and their relative abundance without sequence length dependencies. The program was tested with simulated and real metagenomes, and the results show that our approach predicts the organisms in random communities. Availability and implementation: The code implemented in Python can be found here and a web-sever at http://edwards.sdsu.edu/FOCUS...
