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git config core.symlinksstill returns false in your repo, whilegit config --global core.symlinkssays true. Rungit config --unset core.symlinks; note: no--global!gpedit.msc, hit OK. Then navigate to Local Comp Policy > Computer Configuration > Windows Settings > Security Settings > Local Policies > User Rights Assignment > Create symbolic links, open that option and add your user account.mklinkdistinguishes between "file symbolic links" and "directory symbolic links" (mklink /d). If a repo's symbolic link refers to a directory defined in a submodule, and the submodule has not yet been downloaded, git creates a file symbolic link, which won't work. This results in the vexing "The directory name is invalid" error. The fix it to delete the symlink in the working copy, then restore it withgit checkout. Since the target directory now exists, git (correctly) creates a directory symbolic link. This process doesn't result in any change to the repository.